04 Faculty of Medicine > Service Sector > Institute for Infectious Diseases > Virology

Up a level
Export as [feed] RSS
Group by: Date | Name | Item Type | Refereed | No Grouping
Jump to: 2024 | 2023 | 2022 | 2021 | 2020 | 2019 | 2018 | 2016 | 2015 | 2014
Number of items at this level: 25.

2024

Terrazos Miani, Miguel A; Borcard, Loïc; Gempeler, Sonja; Baumann, Christian; Bittel, Pascal; Leib, Stephen L; Neuenschwander, Stefan; Ramette, Alban Nicolas (2024). NASCarD (Nanopore Adaptive Sampling with Carrier DNA): A Rapid, PCR-Free Method for SARS-CoV-2 Whole-Genome Sequencing in Clinical Samples. Pathogens, 13(1) MDPI AG 10.3390/pathogens13010061

2023

Probst, Lukas; Laloli, Laura; Licheri, Manon Flore; Licheri, Matthias; Gultom, Mitra; Holwerda, Melle; V'kovski, Philip; Dijkman, Ronald (2023). Generation and Characterization of an Influenza D Reporter Virus. Viruses, 15(12), p. 2444. Molecular Diversity Preservation International MDPI 10.3390/v15122444

Blacksell, Stuart D.; Dhawan, Sandhya; Kusumoto, Marina; Le, Kim Khanh; Summermatter, Kathrin; O'Keefe, Joseph; Kozlovac, Joseph; Almuhairi, Salama Suhail; Sendow, Indrawati; Scheel, Christina M.; Ahumibe, Anthony; Masuku, Zibusiso M.; Kojima, Kazunobu; Harper, David R.; Hamilton, Keith (2023). The Biosafety Research Road Map: The Search for Evidence to Support Practices in the Laboratory—SARS-CoV-2. Applied biosafety, 28(2), pp. 87-95. Mary Ann Liebert 10.1089/apb.2022.0039

Blacksell, Stuart D.; Dhawan, Sandhya; Kusumoto, Marina; Le, Kim Khanh; Summermatter, Kathrin; O'Keefe, Joseph; Kozlovac, Joseph; Almuhairi, Salama Suhail; Sendow, Indrawati; Scheel, Christina M.; Ahumibe, Anthony; Masuku, Zibusiso M.; Bennett, Allan M.; Kojima, Kazunobu; Harper, David R.; Hamilton, Keith (2023). The Biosafety Research Road Map: The Search for Evidence to Support Practices in the Laboratory—Zoonotic Avian Influenza and Mycobacterium tuberculosis. Applied biosafety, 28(3), pp. 135-151. Mary Ann Liebert 10.1089/apb.2022.0038

Bigi, Sandra; Ramette, Alban; Barbani, Maria Teresa; Bieri, Andreas; Hoffmann, Angelika; Aebi, Christoph (2023). Acute flaccid myelitis in Switzerland - association with enterovirus D68. Swiss medical weekly, 153, p. 40045. EMH Schweizerischer Ärzteverlag 10.57187/smw.2023.40045

Terrazos Miani, Miguel A.; Borcard, Loïc; Gempeler, Sonja; Baumann, Christian; Bittel, Pascal; Leib, Stephen L.; Neuenschwander, Stefan; Ramette, Alban (2023). NASCarD (Nanopore Adaptive Sampling with Carrier DNA): A rapid, PCR-free method for whole genome sequencing of pathogens in clinical samples (Submitted) (medRxiv). Cold Spring Harbor Laboratory 10.1101/2023.03.10.23287094

2022

Grädel, C; Ireddy, N R; Koch, M C; Baumann, C; Terrazos Miani, M A; Barbani, M T; Steinlin-Schopfer, J; Suter-Riniker, F; Leib, S L; Ramette, A (2022). Genome Sequences of Rare Human Enterovirus Genotypes Recovered from Clinical Respiratory Samples in Bern, Switzerland. Microbiology resource announcements, 11(9), e0027622. American Society for Microbiology 10.1128/mra.00276-22

Uster, Stephanie; Topalli, Zana; Sasse, Thomas; Suter-Riniker, Franziska; Barbani, Maria Teresa (2022). Evaluation of the DiaSorin LIAISON SARS-CoV-2 antigen assay on nasopharyngeal swabs in two different SARS-CoV-2 pandemic waves in Switzerland: The impact of the Omicron variant on its performance. Journal of clinical virology plus, 2(3), p. 100095. Elsevier 10.1016/j.jcvp.2022.100095

Borcard, Loïc; Gempeler, Sonja; Terrazos Miani, Miguel A; Baumann, Christian; Grädel, Carole; Dijkman, Ronald; Suter-Riniker, Franziska; Leib, Stephen L; Bittel, Pascal; Neuenschwander, Stefan; Ramette, Alban (2022). Investigating the Extent of Primer Dropout in SARS-CoV-2 Genome Sequences During the Early Circulation of Delta Variants. Frontiers in Virology, 2 Frontiers 10.3389/fviro.2022.840952

2021

Akello, Joyce Odeke; Kamgang, Richard; Barbani, Maria Teresa; Suter-Riniker, Franziska; Aebi, Christoph; Beuret, Christian; Paris, Daniel H.; Leib, Stephen L.; Ramette, Alban (2021). Genomic analyses of human adenoviruses unravel novel recombinant genotypes associated with severe infections in pediatric patients. Scientific reports, 11(1), p. 24038. Springer Nature 10.1038/s41598-021-03445-y

Steinlin-Schopfer, Jacqueline; Barbani, Maria Teresa; Kamgang, Richard; Zwahlen, Martina; Suter-Riniker, Franziska; Dijkman, Ronald (2021). Evaluation of the Roche antigen rapid test and a cell culture-based assay compared to rRT- PCR for the detection of SARS-CoV-2: A contribution to the discussion about SARS-CoV-2 diagnostic tests and contagiousnes. Journal of clinical virology plus, 1(1-2), p. 100020. Elsevier 10.1016/j.jcvp.2021.100020

Goncalves Cabecinhas, Ana Rita; Roloff, Tim; Stange, Madlen; Bertelli, Claire; Huber, Michael; Ramette, Alban; Chen, Chaoran; Nadeau, Sarah; Gerth, Yannick; Yerly, Sabine; Opota, Onya; Pillonel, Trestan; Schuster, Tobias; Metzger, Cesar M J A; Sieber, Jonas; Bel, Michael; Wohlwend, Nadia; Baumann, Christian; Koch, Michel C.; Bittel, Pascal; ... (2021). SARS-CoV-2 N501Y Introductions and Transmissions in Switzerland from Beginning of October 2020 to February 2021-Implementation of Swiss-Wide Diagnostic Screening and Whole Genome Sequencing. Microorganisms, 9(4), p. 677. MDPI 10.3390/microorganisms9040677

2020

Grädel, Carole; Terrazos Miani, Miguel A.; Baumann, Christian; Barbani, Maria Teresa; Neuenschwander, Stefan; Leib, Stephen L.; Suter-Riniker, Franziska; Ramette, Alban (2020). Whole-Genome Sequencing of Human Enteroviruses from Clinical Samples by Nanopore Direct RNA Sequencing. Viruses, 12(8) Molecular Diversity Preservation International MDPI 10.3390/v12080841

Akello, Joyce Odeke; Kamgang, Richard; Barbani, Maria Teresa; Suter-Riniker, Franziska; Leib, Stephen L; Ramette, Alban (2020). Epidemiology of Human Adenoviruses: A 20-Year Retrospective Observational Study in Hospitalized Patients in Bern, Switzerland. Clinical epidemiology, 12, pp. 353-366. Dove Medical Press 10.2147/CLEP.S246352

Caliaro, Oliver; Barbani, Maria Teresa; Klenja, Shkipe; Morfin, Florence; Frobert, Emilie; Gorgievski, Meri; Steinlin-Schopfer, Jacqueline; Suter-Riniker, Franziska (2020). Phenotypic testing of patient herpes simplex virus type 1 and 2 isolates for acyclovir resistance by a novel method based on real-time cell analysis. Journal of clinical virology, 125(104303), p. 104303. Elsevier 10.1016/j.jcv.2020.104303

Zhou, Hao; Møhlenberg, Michelle; Terczyńska-Dyla, Ewa; Winther, Kasper Grønbjerg; Hansen, Nanna Hougaard; Vad-Nielsen, Johan; Laloli, Laura; Dijkman, Ronald; Nielsen, Anders Lade; Gad, Hans Henrik; Hartmann, Rune (2020). The IFNL4 gene is a non-canonical interferon gene with a unique but evolutionarily conserved regulation. Journal of virology, 94(5) American Society for Microbiology 10.1128/JVI.01535-19

Gultom, Mitra; Laloli, Laura; Dijkman, Ronald (2020). Well-Differentiated Primary Mammalian Airway Epithelial Cell Cultures. In: Maier, Helena J.; Bickerton, Erica (eds.) Coronaviruses. Methods and Protocols. Methods in Molecular Biology: Vol. 2203 (pp. 119-134). Humana, New York, NY 10.1007/978-1-0716-0900-2_10

2019

Schögler, Aline; Caliaro, Oliver Stephan; Brügger, Melanie; Oliveira Esteves, Blandina I.; Nita, Izabela; Gazdhar, Amiq; Geiser, Thomas; Alves, Marco P. (2019). Modulation of the unfolded protein response pathway as an antiviral approach in airway epithelial cells. Antiviral research, 162, pp. 44-50. Elsevier 10.1016/j.antiviral.2018.12.007

Prudent, Michel; Tissot, Jean-Daniel; Fontana, Stefano; Niederhauser, Christoph (2019). Editorial: Transfusion Medicine and Blood. Frontiers in medicine, 5, p. 355. Frontiers 10.3389/fmed.2018.00355

2018

Korten, Insa; Kieninger, Elisabeth; Klenja, Shkipe; Mack, Ines; Schläpfer, Njima; Barbani, Maria Teresa; Regamey, Nicolas; Kuehni, Claudia E; Hilty, Markus; Frey, Urs; Gorgievski, Meri; Casaulta Aebischer, Carmen; Latzin, Philipp (2018). Respiratory viruses in healthy infants and infants with cystic fibrosis: a prospective cohort study. Thorax, 73(1), pp. 13-20. BMJ Publishing Group 10.1136/thoraxjnl-2016-209553

2016

Koller, Roger; Barbani, Maria Teresa; Lüthi, Alexander; Zürcher, Samuel; Steinlin, Jacqueline; Leib, Stephen; Gorgievski, Meri (September 2016). Comparison of respiratory and Meningitis/Encephalitis viruses detected by FilmArray® multiplex PCR versus real-time PCR. Journal of clinical virology, 82, S39. Elsevier 10.1016/j.jcv.2016.08.076

Korten, Insa Christina Severine; Mika, Moana; Klenja, Shkipe; Kieninger, Elisabeth; Mack, Ines; Barbani, Maria Teresa; Gorgievski, Meri; Frey, Urs; Hilty, Markus; Latzin, Philipp (2016). Interactions of Respiratory Viruses and the Nasal Microbiota during the First Year of Life in Healthy Infants. mSphere, 1(6) American Society for Microbiology 10.1128/mSphere.00312-16

2015

Schüpbach, Jörg; Niederhauser, Christoph; Yerly, Sabine; Regenass, Stephan; Gorgievski, Meri; Aubert, Vincent; Ciardo, Diana; Klimkait, Thomas; Dollenmaier, Günter; Andreutti, Corinne; Martinetti, Gladys; Brandenberger, Marcel; Gebhardt, Martin D. (2015). Decreasing Proportion of Recent Infections among Newly Diagnosed HIV-1 Cases in Switzerland, 2008 to 2013 Based on Line-Immunoassay-Based Algorithms. PLoS ONE, 10(7), e0131828. Public Library of Science 10.1371/journal.pone.0131828

Vinikoor, Michael J.; Zürcher, Samuel; Musukuma, Kalo; Kachuwaire, Obert; Rauch, Andri; Chi, Benjamin H.; Gorgievski, Meri; Zwahlen, Marcel; Wandeler, Gilles (2015). Hepatitis B viral load in dried blood spots: A validation study in Zambia. Journal of clinical virology, 72, pp. 20-24. Elsevier 10.1016/j.jcv.2015.08.019

2014

Ott, Sebastian Robert; Meier, N; Kolditz, M; Rohde, G; Flick, H; Pletz, M (9 May 2014). Pulmonary nocardiosis - clinical evaluation of 42 patients (Unpublished). In: Annual Meeting of the Swiss Society for Pneumology. Interlaken. 08.05.-09.05.2014.

This list was generated on Tue Mar 19 02:25:56 2024 CET.
Provide Feedback