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Schmeltz, Margaux; Ivanovic, Aleksandra; Schlepütz, Christian M; Wimmer, Wilhelm; Remenschneider, Aaron K; Caversaccio, Marco; Stampanoni, Marco; Anschuetz, Lukas; Bonnin, Anne (2024). The human middle ear in motion: 3D visualization and quantification using dynamic synchrotron-based X-ray imaging. Communications biology, 7(157) Springer Nature 10.1038/s42003-023-05738-6
Blaskovic, Sanja; Anagnostopoulou, Pinelopi; Borisova, Elena; Schittny, Dominik; Donati, Yves; Haberthür, David; Zhou-Suckow, Zhe; Mall, Marcus A; Schlepütz, Christian M; Stampanoni, Marco; Barazzone-Argiroffo, Constance; Schittny, Johannes C (2023). Airspace Diameter Map-A Quantitative Measurement of All Pulmonary Airspaces to Characterize Structural Lung Diseases. Cells, 12(19) MDPI 10.3390/cells12192375
Tessarini, Stefan; Fix, Michael Karl; Manser, Peter; Volken, Werner; Frei, Daniel; Mercolli, Lorenzo; Stampanoni, Marco (2022). Semi-classical Monte Carlo algorithm for the simulation of X-ray grating interferometry. Scientific reports, 12(1), p. 2485. Springer Nature 10.1038/s41598-022-05965-7
Dejea, Hector; Schlepütz, Christian M.; Méndez-Carmona, Natalia; Arnold, Maria; Garcia-Canadilla, Patricia; Longnus, Sarah L.; Stampanoni, Marco; Bijnens, Bart; Bonnin, Anne (2022). A tomographic microscopy-compatible Langendorff system for the dynamic structural characterization of the cardiac cycle. Frontiers in cardiovascular medicine, 9 Frontiers 10.3389/fcvm.2022.1023483
Borisova, Elena; Lovric, Goran; Miettinen, Arttu; Fardin, Luca; Bayat, Sam; Larsson, Anders; Stampanoni, Marco; Schittny, Johannes C.; Schlepütz, Christian M. (2021). Micrometer-resolution X-ray tomographic full-volume reconstruction of an intact post-mortem juvenile rat lung. Histochemistry and cell biology, 155(2), pp. 215-226. Springer-Verlag https://doi.org/10.1007/s00418-020-01868-8
Miettinen, Arttu; Vogiatzis Oikonomidis, Ioannis; Bonnin, Anne; Stampanoni, Marco (2019). NRStitcher: Non-rigid stitching of terapixel-scale volumetric images. Bioinformatics, 35(24), pp. 5290-5297. Oxford University Press 10.1093/bioinformatics/btz423
Ernst, Marina; Manser, Peter; Dula, Karl; Volken, Werner; Stampanoni, Marco; Fix, Michael (2017). TLD measurements and Monte Carlo calculations of head and neck organ and effective doses for Cone Beam Computed Tomography using 3D Accuitomo 170. Dento maxillo facial radiology, 46(7), p. 20170047. British Institute of Radiology 10.1259/dmfr.20170047
Vogiatzis Oikonomidis, Ioannis; Lovric, Goran; Cremona, Tiziana Patrizia; Arcadu, Filippo; Patera, Alessandra; Schittny, Johannes; Stampanoni, Marco (2017). Imaging samples larger than the field of view: the SLS experience. Journal of Physics: Conference Series, 849, 012004. Institute of Physics Publishing IOP 10.1088/1742-6596/849/1/012004
Vogiatzis Oikonomidis, Ioannis; Cremona, Tiziana Patrizia; Lovric, Goran; Arcadu, Filippo; Stampanoni, Marco; Schittny, Johannes (2017). Effective segmentation of fresh post-mortem murine lung parenchyma in phase contrast X-ray tomographic microscopy images. Journal of Physics: Conference Series, 849(1), 012006. Institute of Physics Publishing IOP 10.1088/1742-6596/849/1/012006
Lovric, Goran; Vogiatzis Oikonomidis, Ioannis; Mokso, Rajmund; Stampanoni, Marco; Roth-Kleiner, Matthias; Schittny, Johannes (2017). Automated computer-assisted quantitative analysis of intact murine lungs at the alveolar scale. PLoS ONE, 12(9), e0183979. Public Library of Science 10.1371/journal.pone.0183979
Lovric, Goran; Mokso, Rajmund; Arcadu, Filippo; Vogiatzis Oikonomidis, Ioannis; Schittny, Johannes; Roth-Kleiner, Matthias; Stampanoni, Marco (2017). Tomographic in vivo microscopy for the study of lung physiology at the alveolar level. Scientific Reports, 7(1), p. 12545. Nature Publishing Group 10.1038/s41598-017-12886-3
Barré, Sébastien F; Haberthür, David; Cremona, Tiziana Patrizia; Stampanoni, Marco; Schittny, Johannes C (2016). The total number of acini remains constant throughout postnatal rat lung development. American journal of physiology - lung cellular and molecular physiology, 311(6), L1082-L1089. American Physiological Society 10.1152/ajplung.00325.2016
Barré, Sébastien; Haberthür, David; Stampanoni, Marco; Schittny, Johannes (2014). Efficient estimation of the total number of acini in adult rat lung. Physiological reports, 2(7), e12063. The American Physiological Society 10.14814/phy2.12063
Weber, Benedikt; Robert, Jérôme; Ksiazek, Agnieszka; Wyss, Yves; Frese, Laura; Slamecka, Jaroslav; Kehl, Debora; Modregger, Peter; Peter, Silvia; Stampanoni, Marco; Proulx, Steven; Falk, Volkmar; Hoerstrup, Simon P (2014). Living-engineered valves for transcatheter venous valve repair. Tissue engineering. Part C, Methods, 20(6), pp. 451-463. Mary Ann Liebert 10.1089/ten.TEC.2013.0187
Peter, Silvia; Modregger, Peter; Fix, Michael; Volken, Werner; Frei, Daniel; Manser, Peter; Stampanoni, Marco (2014). Combining Monte Carlo methods with coherent wave optics for the simulation of phase-sensitive X-ray imaging. Journal of synchrotron radiation, 21(Pt 3), pp. 613-622. Blackwell Publishing 10.1107/S1600577514000952
Roth-Kleiner, Matthias; Berger, Thomas M; Gremlich, Sandrine; Tschanz, Stefan A.; Mund, Sonja; Post, Martin; Stampanoni, Marco; Schittny, Johannes (2014). Neonatal steroids induce a down-regulation of tenascin-C and elastin and cause a deceleration of the first phase and an acceleration of the second phase of lung alveolarization. Histochemistry and cell biology, 141(1), pp. 75-84. Berlin: Springer 10.1007/s00418-013-1132-7
Haberthür, David; Barré, Sébastien; Tschanz, Stefan A.; Yao, Eveline; Stampanoni, Marco; Schittny, Johannes (2013). Visualization and stereological characterization of individual rat lung acini by high-resolution X-ray tomographic microscopy. Journal of applied physiology, 115(9), pp. 1379-1387. Bethesda, Md.: American Physiological Society 10.1152/japplphysiol.00642.2013
Lovric, Goran; Barré, Sébastien F.; Schittny, Johannes C.; Roth-Kleiner, Matthias; Stampanoni, Marco; Mokso, Rajmund (2013). Dose optimization approach to fast X-ray microtomography of the lung alveoli. Journal of applied crystallography, 46(Pt. 4), pp. 856-860. Blackwell 10.1107/S0021889813005591
Trummer-Menzi, Eliane; Gremlich, Sandrine; Schittny, Johannes Constantin; Dénervaud, Valérie; Stampanoni, Marco; Post, Martin; Gerber, Stefan; Roth-Kleiner, Matthias (2012). Evolution of gene expression changes in newborn rats after mechanical ventilation with reversible intubation. Pediatric pulmonology, 47(12), pp. 1204-14. Hoboken, N.J.: Wiley-Blackwell 10.1002/ppul.22613
Haberthür, David; Hintermüller, Christoph; Marone, Federica; Schittny, Johannes C; Stampanoni, Marco (2010). Radiation dose optimized lateral expansion of the field of view in synchrotron radiation X-ray tomographic microscopy. Journal of synchrotron radiation, 17(5), pp. 590-9. Oxford: Blackwell Publishing 10.1107/S0909049510019618
Schittny, Johannes C; Mund, Sonja I; Stampanoni, Marco (2008). Evidence and structural mechanism for late lung alveolarization. American journal of physiology - lung cellular and molecular physiology, 294(2), L246-54. Bethesda, Md.: American Physiological Society 10.1152/ajplung.00296.2007
Mund, Sonja I; Stampanoni, Marco; Schittny, Johannes C (2008). Developmental alveolarization of the mouse lung. Developmental dynamics, 237(8), pp. 2108-16. New York, N.Y.: John Wiley & Sons 10.1002/dvdy.21633
Zhu, Chengchen; Bertholet, Jenny; Guyer, Gian; Mueller, Silvan; Loebner, Hannes; Aebersold, D. M.; Stampanoni, Marco; Fix, Michael; Manser, Peter (September 2023). Simultaneous photon and electron beam-angle optimization for dynamic-collimator mixed beam radiotherapy (colli-DYMBER). Strahlentherapie und Onkologie, 11, p. 1063. Springer
Duetschler, Alisha; Müller, Silvan Andreas; Manser, Peter; Aebersold, Daniel; Stampanoni, Marco; Fix, Michael (December 2019). Development of an in-house VMAT treatment planning. Strahlentherapie und Onkologie, 195(12), pp. 1129-1130. Berlin Heidelberg: Springer
Guyer, Gian Mauro Carlo; Küng, Reto; Volken, Werner; Stampanoni, Marco; Manser, Peter; Fix, Michael (December 2019). Influence of magnetic field transport parameters on accuracy and efficiency of electron transport in EGSnrc. Strahlentherapie und Onkologie, 195(12), p. 1131. Berlin Heidelberg: Springer
Küng, Reto; Oborn, Brad; Roberts, N; Causer, T; Müller, Silvan Andreas; Stampanoni, Marco; Manser, Peter; Keall, Paul; Fix, Michael (December 2019). Modeling and measuring clinical electron beams in magnetic fields: investigating the potential of future MR-guided electron therapy. Strahlentherapie und Onkologie, 195(12), p. 1130. Heidelberg Berlin: Springer
