Bodmer, Thomas

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Journal Article

Benvenga, Vanni; Cuénod, Aline; Purushothaman, Srinithi; Dasen, Gottfried; Weisser, Maja; Bassetti, Stefano; Roloff, Tim; Siegemund, Martin; Heininger, Ulrich; Bielicki, Julia; Wehrli, Marianne; Friderich, Paul; Frei, Reno; Widmer, Andreas; Herzog, Kathrin; Fankhauser, Hans; Nolte, Oliver; Bodmer, Thomas; Risch, Martin; Dubuis, Olivier; ... (2024). Historic methicillin-resistant Staphylococcus aureus: expanding current knowledge using molecular epidemiological characterization of a Swiss legacy collection. Genome medicine, 16(23) BioMed Central 10.1186/s13073-024-01292-w

Campos-Madueno, Edgar I; Moser, Aline I; Jost, Géraldine; Maffioli, Carola; Bodmer, Thomas; Perreten, Vincent; Endimiani, Andrea (2022). Erratum to 'Carbapenemase-producing Klebsiella pneumoniae strains in Switzerland: human and non-human settings may share high-risk clones' [Journal of Global Antimicrobial Resistance 28 (2022) 206-215]. Journal of global antimicrobial resistance, 31(394), p. 394. Elsevier 10.1016/j.jgar.2022.08.020

Campos-Madueno, Edgar I.; Moser, Aline I.; Jost, Géraldine; Maffioli, Carola; Bodmer, Thomas; Perreten, Vincent; Endimiani, Andrea (2022). Carbapenemase-producing Klebsiella pneumoniae strains in Switzerland: Human and non-human settings may share high-risk clones. Journal of global antimicrobial resistance, 28, pp. 206-215. Elsevier 10.1016/j.jgar.2022.01.016

Chen, Chaoran; Nadeau, Sarah Ann; Topolsky, Ivan; Manceau, Marc; Huisman, Jana S; Jablonski, Kim Philipp; Fuhrmann, Lara; Dreifuss, David; Jahn, Katharina; Beckmann, Christiane; Redondo, Maurice; Noppen, Christoph; Risch, Lorenz; Risch, Martin; Wohlwend, Nadia; Kas, Sinem; Bodmer, Thomas; Roloff, Tim; Stange, Madlen; Egli, Adrian; ... (2021). Quantification of the spread of SARS-CoV-2 variant B.1.1.7 in Switzerland. Epidemics, 37, p. 100480. Elsevier 10.1016/j.epidem.2021.100480

Campos-Madueno, Edgar I.; Moser, Aline I.; Risch, Martin; Bodmer, Thomas; Endimiani, Andrea (2021). Exploring the global spread of Klebsiella grimontii isolates possessing blaVIM-1 and mcr-9. Antimicrobial agents and chemotherapy, 65(9), e0072421. American Society for Microbiology 10.1128/AAC.00724-21

Campos-Madueno, Edgar I.; Sigrist, Thomas; Flückiger, Ursula M.; Risch, Lorenz; Bodmer, Thomas; Endimiani, Andrea (2021). First report of a blaVIM-1 metallo-β-lactamase-possessing Klebsiella michiganensis. Journal of global antimicrobial resistance, 25, pp. 310-314. Elsevier 10.1016/j.jgar.2021.03.027

Seth-Smith, Helena M B; Biggel, Michael; Roloff, Tim; Hinic, Vladimira; Bodmer, Thomas; Risch, Martin; Casanova, Carlo; Widmer, Andreas; Sommerstein, Rami; Marschall, Jonas; Tschudin-Sutter, Sarah; Egli, Adrian (2021). Transition From PCR-Ribotyping to Whole Genome Sequencing Based Typing of Clostridioides difficile. Frontiers in cellular and infection microbiology, 11, p. 681518. Frontiers 10.3389/fcimb.2021.681518

Rohrer, Felix; Wendt, Malte; Noetzli, Hubert; Risch, Lorenz; Bodmer, Thomas; Cottagnoud, Philippe; Hermann, Tanja; Limacher, Andreas; Gahl, Brigitta; Bruegger, Jan (2021). Preoperative decolonization and periprosthetic joint infections-A randomized controlled trial with 2-year follow-up. Journal of orthopaedic research, 39(2), pp. 333-338. Wiley 10.1002/jor.24916

Campos-Madueno, Edgar I.; Gmuer, Christian; Risch, Martin; Bodmer, Thomas; Endimiani, Andrea (2021). Characterization of a new blaVIM-1-carrying IncN2 plasmid from an Enterobacter hormaechei subsp. steigerwaltii. Journal of global antimicrobial resistance, 24, pp. 325-327. Elsevier 10.1016/j.jgar.2021.01.017

Weber, Myriam C; Risch, Martin; Thiel, Sarah L; Grossmann, Kirsten; Nigg, Susanne; Wohlwend, Nadia; Lung, Thomas; Hillmann, Dorothea; Ritzler, Michael; Ferrara, Francesca; Bigler, Susanna; Egli, Konrad; Bodmer, Thomas; Imperiali, Mauro; Salimi, Yacir; Fleisch, Felix; Cusini, Alexia; Heer, Sonja; Renz, Harald; Paprotny, Matthias; ... (2021). Characteristics of Three Different Chemiluminescence Assays for Testing for SARS-CoV-2 Antibodies. Disease markers, 2021, p. 8810196. Hindawi 10.1155/2021/8810196

Egli, Konrad; Wagner, Karoline; Keller, Peter M.; Risch, Lorenz; Risch, Martin; Bodmer, Thomas (2020). Comparison of the Diagnostic Performance of qPCR, Sanger Sequencing, and Whole-Genome Sequencing in Determining Clarithromycin and Levofloxacin Resistance in Helicobacter pylori. Frontiers in cellular and infection microbiology, 10(596371), p. 596371. Frontiers 10.3389/fcimb.2020.596371

Schaffner, Anna; Risch, Lorenz; Aeschbacher, Stefanie; Risch, Corina; Weber, Myriam C; Thiel, Sarah L; Jüngert, Katharina; Pichler, Michael; Grossmann, Kirsten; Wohlwend, Nadia; Lung, Thomas; Hillmann, Dorothea; Bigler, Susanna; Bodmer, Thomas; Imperiali, Mauro; Renz, Harald; Kohler, Philipp; Vernazza, Pietro; Kahlert, Christian R; Twerenbold, Raphael; ... (2020). Characterization of a Pan-Immunoglobulin Assay Quantifying Antibodies Directed against the Receptor Binding Domain of the SARS-CoV-2 S1-Subunit of the Spike Protein: A Population-Based Study. Journal of clinical medicine, 9(12) MDPI 10.3390/jcm9123989

Kuenzli, Andrea B.; Burri, Silvie; Casanova, Carlo; Sommerstein, Rami; Buetti, Niccolo; Seth-Smith, Helena Mb; Bodmer, Thomas; Egli, Adrian; Marschall, Jonas (2020). Successful Management of a Clostridioides difficile Ribotype 027 Outbreak with a Lean Intervention Bundle. The journal of hospital infection, 106(2), pp. 240-245. Elsevier 10.1016/j.jhin.2020.07.034

Baron, Rita Christiane; Risch, Lorenz; Weber, Myriam; Thiel, Sarah; Grossmann, Kirsten; Wohlwend, Nadia; Lung, Thomas; Hillmann, Dorothea; Ritzler, Michael; Bigler, Susanna; Egli, Konrad; Ferrara, Francesca; Bodmer, Thomas; Imperiali, Mauro; Heer, Sonja; Renz, Harald; Flatz, Lukas; Kohler, Philipp; Vernazza, Pietro; Kahlert, Christian R; ... (2020). Frequency of serological non-responders and false-negative RT-PCR results in SARS-CoV-2 testing: a population-based study. Clinical chemistry and laboratory medicine, 58(12), pp. 2131-2140. Walter de Gruyter 10.1515/cclm-2020-0978

Rohrer, Felix; Nötzli, Hubert; Risch, Lorenz; Bodmer, Thomas; Cottagnoud, Philippe; Hermann, Tanja; Limacher, Andreas; Fankhauser, Niklaus; Wagner, Karoline; Brügger, Jan (2020). Does Preoperative Decolonization Reduce Surgical Site Infections in Elective Orthopaedic Surgery? A Prospective Randomized Controlled Trial. Clinical orthopaedics and related research, 478(8), pp. 1790-1800. Wolters Kluwer 10.1097/CORR.0000000000001152

Campos-Madueno, Edgar I.; Bernasconi, Odette J.; Moser, Aline I.; Keller, Peter M.; Luzzaro, Francesco; Maffioli, Carola; Bodmer, Thomas; Kronenberg, Andreas; Endimiani, Andrea (2020). Rapid Increase of CTX-M-Producing Shigella sonnei Isolates in Switzerland: Spread of Common Plasmids and International Clones. Antimicrobial agents and chemotherapy, 64(10) American Society for Microbiology 10.1128/AAC.01057-20

Risch, Martin; Weber, Myriam; Thiel, Sarah; Grossmann, Kirsten; Wohlwend, Nadia; Lung, Thomas; Hillmann, Dorothea; Ritzler, Michael; Ferrara, Francesca; Bigler, Susanna; Egli, Konrad; Bodmer, Thomas; Imperiali, Mauro; Salimi, Yacir; Fleisch, Felix; Cusini, Alexia; Renz, Harald; Kohler, Philipp; Vernazza, Pietro; Kahlert, Christian R; ... (2020). Temporal Course of SARS-CoV-2 Antibody Positivity in Patients with COVID-19 following the First Clinical Presentation. BioMed research international, 2020, p. 9878453. Hindawi Publishing Corporation 10.1155/2020/9878453

Hella, Jerry; Cercamondi, Colin I; Mhimbira, Francis; Sasamalo, Mohamed; Stoffel, Nicole; Zwahlen, Marcel; Bodmer, Thomas; Gagneux, Sebastien; Reither, Klaus; Zimmermann, Michael B; Risch, Lorenz; Fenner, Lukas (2018). Anemia in tuberculosis cases and household controls from Tanzania: Contribution of disease, coinfections, and the role of hepcidin. PLoS ONE, 13(4), e0195985. Public Library of Science 10.1371/journal.pone.0195985

Do Couto Pires, Joao Pedro; Tinguely, Regula; Bodmer, Thomas; Luzzaro, Francesco; Endimiani, Andrea (2016). Comparison of the in-house made Carba-NP and Blue-Carba tests: Considerations for better detection of carbapenemase-producing Enterobacteriaceae. Journal of microbiological methods, 122, pp. 33-37. Elsevier 10.1016/j.mimet.2016.01.002

Schneider, Sarah; Tinguely, Regula; Droz, Sara Christine; Hilty, Markus; Donà, Valentina; Bodmer, Thomas; Endimiani, Andrea (2015). Antibiotic Susceptibility and Sequence Type Distribution of Ureaplasma Species Isolated from Genital Samples in Switzerland. Antimicrobial agents and chemotherapy, 59(10), pp. 6026-6031. American Society for Microbiology 10.1128/AAC.00895-15

Stucki, David; Ballif, Marie; Bodmer, Thomas; Coscolla, Mireia; Maurer, Anne-Marie; Droz, Sara Christine; Butz, Christa; Borrell, Sonia; Längle, Christel; Feldmann, Julia; Furrer, Hansjakob; Mordasini, Carlo; Helbling, Peter; Rieder, Hans L; Egger, Matthias; Gagneux, Sébastien; Fenner, Lukas (2015). Tracking a tuberculosis outbreak over 21 years: strain-specific single nucleotide polymorphism-typing combined with targeted whole genome sequencing. Journal of infectious diseases, 211(8), pp. 1306-1316. Oxford University Press 10.1093/infdis/jiu601

Seiffert, Salome Nadja; Perreten, Vincent; Johannes, Sönke; Droz, Sara Christine; Bodmer, Thomas; Endimiani, Andrea (2014). OXA-48 carbapenemase-producing Salmonella enterica serovar Kentucky isolate of sequence type 198 in a patient transferred from Libya to Switzerland. Antimicrobial agents and chemotherapy, 58(4), pp. 2446-2449. American Society for Microbiology 10.1128/AAC.02417-13

Fenner, Lukas; Egger, Matthias; Bodmer, Thomas; Furrer, Hansjakob; Ballif, Marie; Battegay, Manuel; Helbling, Peter; Fehr, Jan; Gsponer, Thomas; Rieder, Hans L.; Zwahlen, Marcel; Hoffmann, Matthias; Bernasconi, Enos; Cavassini, Matthias; Calmy, Alexandra; Dolina, Marisa; Frei, Reno; Janssens, Jean-Paul; Borrell, Sonia; Stucki, David; ... (2013). HIV infection disrupts the sympatric host-pathogen relationship in human tuberculosis. PLoS genetics, 9(3), e1003318. Public Library of Science 10.1371/journal.pgen.1003318

Fenner, Lukas; Gagneux, Sebastien; Janssens, Jean-Paul; Fehr, Jan; Cavassini, Matthias; Hoffmann, Matthias; Bernasconi, Enos; Schrenzel, Jacques; Bodmer, Thomas; Böttger, Erik C; Helbling, Peter; Egger, Matthias; for the Swiss HIV Cohort and Molecular Epidemiology of Tuberculo, (2012). Tuberculosis in HIV-Negative and HIV-Infected Patients in a Low-Incidence Country: Clinical Characteristics and Treatment Outcomes. PLoS ONE, 7(3), e34186. Lawrence, Kans.: Public Library of Science 10.1371/journal.pone.0034186

Fenner, Lukas; Egger, Matthias; Bodmer, Thomas; Altpeter, Ekkehardt; Zwahlen, Marcel; Jaton, Katia; Pfyffer, Gaby E; Borrell, Sonia; Dubuis, Olivier; Bruderer, Thomas; Siegrist, Hans H; Furrer, Hansjakob; Calmy, Alexandra; Fehr, Jan; Stalder, Jesica Mazza; Ninet, Béatrice; Böttger, Erik C; Gagneux, Sebastien; HIV Cohort Study, Swiss Molecular Epidemiol (2012). Effect of Mutation and Genetic Background on Drug Resistance in Mycobacterium tuberculosis. Antimicrobial agents and chemotherapy, 56(6), pp. 3047-3053. Washington, D.C.: American Society for Microbiology 10.1128/AAC.06460-11

Fenner, Lukas; Gagneux, Sebastien; Helbling, Peter; Battegay, Manuel; Rieder, Hans L; Pfyffer, Gaby E; Zwahlen, Marcel; Furrer, Hansjakob; Siegrist, Hans H; Fehr, Jan; Dolina, Marisa; Calmy, Alexandra; Stucki, David; Jaton, Katia; Janssens, Jean-Paul; Stalder, Jesica Mazza; Bodmer, Thomas; Ninet, Beatrice; Böttger, Erik C; Egger, Matthias; ... (2012). Mycobacterium tuberculosis transmission in a country with low tuberculosis incidence: role of immigration and HIV infection. Journal of clinical microbiology, 50(2), pp. 388-395. Washington, D.C.: American Society for Microbiology 10.1128/JCM.05392-11

Lyashchenko, Konstantin P; Greenwald, Rena; Esfandiari, Javan; Lecu, Alexis; Waters, W Ray; Posthaus, Horst; Bodmer, Thomas; Janssens, Jean-Paul; Aloisio, Fabio; Graubner, Claudia; Grosclaude, Eléonore; Piersigilli, Alessandra; Schiller, Irene (2012). Pulmonary Disease due to Mycobacterium tuberculosis in a Horse: Zoonotic Concerns and Limitations of Antemortem Testing. Veterinary medicine international, 2012, p. 642145. SAGE-Hindawi 10.1155/2012/642145

Macheras, Edouard; Roux, Anne-Laure; Bastian, Sylvaine; Leão, Sylvia Cardoso; Palaci, Moises; Sivadon-Tardy, Valérie; Gutierrez, Cristina; Richter, Elvira; Rüsch-Gerdes, Sabine; Pfyffer, Gaby; Bodmer, Thomas; Cambau, Emmanuelle; Gaillard, Jean-Louis; Heym, Beate (2011). Multilocus sequence analysis and rpoB sequencing of Mycobacterium abscessus (sensu lato) strains. Journal of clinical microbiology, 49(2), pp. 491-9. Washington, D.C.: American Society for Microbiology 10.1128/JCM.01274-10

Fenner, Lukas; Malla, Bijaya; Ninet, Béatrice; Dubuis, Olivier; Stucki, David; Borrell, Sonia; Huna, Thembela; Bodmer, Thomas; Egger, Matthias; Gagneux, Sebastien (2011). "Pseudo-Beijing": evidence for convergent evolution in the direct repeat region of Mycobacterium tuberculosis. PLoS ONE, 6(9), e24737. Lawrence, Kans.: Public Library of Science 10.1371/journal.pone.0024737

Rausch, Alma-Verena; Gross, Ariane; Droz, Sara; Bodmer, Thomas; Surbek, Daniel V (2009). Group B Streptococcus colonization in pregnancy: prevalence and prevention strategies of neonatal sepsis. Journal of perinatal medicine, 37(2), pp. 124-9. Berlin: Walter de Gruyter 10.1515/JPM.2009.020

Müller, Stefan; Schaffer, Thomas; Schoepfer, Alain M; Hilty, Annamarie; Bodmer, Thomas; Seibold, Frank (2008). Partial overlap of anti-mycobacterial, and anti-Saccharomyces cerevisiae mannan antibodies in Crohn's disease. World journal of gastroenterology, 14(23), pp. 3650-61. Beijing (China): WJG Press 10.3748/wjg.14.3650

Stebler, Ariane; Iseli, Patricia; Mühlemann, Kathrin; Bodmer, Thomas (2008). Whole-blood interferon-gamma release assay for baseline tuberculosis screening of healthcare workers at a Swiss university hospital. Infection control and hospital epidemiology, 29(7), pp. 681-3. Thorofare, N.J.: Cambridge University Press 10.1086/588587

Kipfer, Beat; Reichmuth, Markus; Büchler, Markus; Meisels, Cyrus; Bodmer, Thomas (2008). Tuberculosis in a Swiss army training camp: contact investigation using an Interferon gamma release assay. Swiss medical weekly, 138(17-18), pp. 267-72. Muttenz: EMH Schweizerischer Ärzteverlag

Streit, Markus; Böhlen, Lorenz M; Hunziker, Thomas; Zimmerli, Stefan; Tscharner, Gion G; Nievergelt, Helga; Bodmer, Thomas; Braathen, Lasse R (2006). Disseminated Mycobacterium marinum infection with extensive cutaneous eruption and bacteremia in an immunocompromised patient. European journal of dermatology EJD, 16(1), pp. 79-83. Montrouge: John Libbey Eurotext

Diaz, Diana; Döbeli, Heinz; Yeboah-Manu, Dorothy; Mensah-Quainoo, Ernestina; Friedlein, Arno; Soder, Nicole; Rondini, Simona; Bodmer, Thomas; Pluschke, Gerd (2006). Use of the immunodominant 18-kiloDalton small heat shock protein as a serological marker for exposure to Mycobacterium ulcerans. Clinical and vaccine immunology, 13(12), pp. 1314-21. Washington, D.C.: American Society for Microbiology 10.1128/CVI.00254-06

Fux, C; Bodmer, Thomas; Ziswiler, Hans Rudolf; Leib, Stephen (2003). [Nocardia cyriacigeorgici: First report of invasive human infection]. Deutsche medizinische Wochenschrift, 128(19), pp. 1038-1041. Thieme 10.1055/s-2003-39102

Thiermann, Sacha; Munzinger, Jürg; Bodmer, Thomas (2002). Comparison of phenotypic and genotypic methods for the detection of clarithromycin resistance in Mycobacterium avium. Journal of antimicrobial chemotherapy, 49(4), pp. 679-681. Oxford University Press 10.1093/jac/49.4.679

Loeffler, Jutta M.; Bodmer, Thomas; Zimmerli, Werner; Leib, Stephen L. (2001). Nocardial brain abscess: observation of treatment strategies and outcome in Switzerland from 1992 to 1999. Infection, 29(6), pp. 337-341. Springer-Medizin-Verlag 10.1007/s15010-001-1147-1

Bodmer, Thomas; Miltner, Elizabeth; Bermudez, Luiz E. (2000). Mycobacterium avium resists exposure to the acidic conditions of the stomach. FEMS microbiology letters, 182(1), pp. 45-49. Elsevier 10.1111/j.1574-6968.2000.tb08871.x

Bodmer, Thomas; Zürcher, Gabriela; Imboden, Paul; Telenti, Amalio (1995). Mutation position and type of substitution in the β-subunit of the RNA polymerase influence in-vitro activity of rifamycins in rifampicin-resistant Mycobacterium tuberculosis. Journal of antimicrobial chemotherapy, 35(2), pp. 345-348. Oxford University Press 10.1093/jac/35.2.345

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